Details for gene set V$RSRFC4

Table: GSEA Results Summary

Dataset	RNR_GSEA_DESEQ2_PVAL
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$RSRFC4_01
Enrichment Score (ES)	-0.14516814
Normalized Enrichment Score (NES)	-2.54455
Nominal p-value	0.0
FDR q-value	0.025348555
FWER p-Value	0.029

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LUC7L	484	0.973	-0.0220	No
2	ITSN1	501	0.972	-0.0186	No
3	NR2F1	503	0.972	-0.0143	No
4	CYP26B1	519	0.971	-0.0108	No
5	ZHX2	632	0.965	-0.0126	No
6	TIMP2	798	0.957	-0.0172	No
7	GPC4	839	0.955	-0.0151	No
8	SCML1	991	0.948	-0.0190	No
9	HFE2	1116	0.941	-0.0214	No
10	ANKMY2	1227	0.934	-0.0231	No
11	PMEPA1	1355	0.927	-0.0257	No
12	FAM117A	1367	0.926	-0.0220	No
13	RALY	1579	0.916	-0.0291	No
14	USP2	1766	0.905	-0.0349	No
15	NCAN	2004	0.892	-0.0435	No
16	TRDN	2023	0.891	-0.0402	No
17	LRRC39	2034	0.890	-0.0364	No
18	RTBDN	2120	0.886	-0.0367	No
19	MYL3	2260	0.879	-0.0400	No
20	PTPRO	2416	0.871	-0.0441	No
21	HAO1	2533	0.865	-0.0461	No
22	FST	2695	0.856	-0.0505	No
23	CARTPT	2754	0.853	-0.0493	No
24	FOXP1	2775	0.852	-0.0461	No
25	CLRN1	3084	0.834	-0.0586	No
26	ARAP2	3294	0.822	-0.0656	No
27	TYRO3	3297	0.822	-0.0614	No
28	HOXC4	3449	0.815	-0.0653	No
29	BNIP3	3468	0.813	-0.0620	No
30	SLC26A9	3488	0.813	-0.0587	No
31	ZNF362	3497	0.812	-0.0548	No
32	SSH3	3500	0.812	-0.0506	No
33	STAC	3534	0.810	-0.0481	No
34	DKK2	3687	0.801	-0.0520	No
35	POU4F2	3829	0.794	-0.0554	No
36	LECT1	3973	0.786	-0.0589	No
37	CAV3	4104	0.778	-0.0616	No
38	SLC32A1	4137	0.776	-0.0590	No
39	ITGA7	4189	0.774	-0.0575	No
40	C16orf52	4329	0.766	-0.0608	No
41	C18orf25	4563	0.754	-0.0691	No
42	ACTA1	4576	0.753	-0.0654	No
43	MRPS23	4618	0.751	-0.0634	No
44	ATP1B2	4706	0.746	-0.0638	No
45	FBXO40	4743	0.744	-0.0614	No
46	SV2A	4806	0.741	-0.0605	No
47	ADAM23	4862	0.737	-0.0592	No
48	THOC6	4912	0.735	-0.0575	No
49	RASGRF1	4976	0.730	-0.0566	No
50	MYOZ2	5093	0.723	-0.0586	No
51	PTPN1	5262	0.713	-0.0634	No
52	EEF1A2	5304	0.710	-0.0614	No
53	WBP4	5352	0.708	-0.0596	No
54	FGF12	5404	0.706	-0.0581	No
55	CUL3	5536	0.699	-0.0609	No
56	HCFC1R1	5601	0.696	-0.0601	No
57	ALPK2	5615	0.695	-0.0564	No
58	LZTS2	5748	0.688	-0.0593	No
59	RBMS3	6003	0.675	-0.0688	No
60	NR4A1	6137	0.668	-0.0717	No
61	SMYD1	6233	0.662	-0.0726	No
62	TSPAN13	6320	0.658	-0.0729	No
63	PTCH1	6566	0.645	-0.0819	No
64	ST6GALNAC5	6590	0.643	-0.0789	No
65	MEOX2	6621	0.642	-0.0762	No
66	ACTC1	6792	0.631	-0.0811	No
67	ELMO1	6907	0.626	-0.0830	No
68	SMPX	6945	0.624	-0.0807	No
69	ACTR3B	6950	0.624	-0.0766	No
70	CNTN1	7114	0.614	-0.0812	No
71	EXTL1	7256	0.607	-0.0845	No
72	TNNI2	7362	0.602	-0.0859	No
73	AKIRIN1	7392	0.600	-0.0832	No
74	THBS2	7770	0.582	-0.0994	No
75	CCDC140	7782	0.581	-0.0957	No
76	TCEA3	7958	0.570	-0.1009	No
77	PIK3R3	8001	0.568	-0.0988	No
78	RGS3	8343	0.549	-0.1131	No
79	HRASLS	8534	0.537	-0.1191	No
80	PAK6	8717	0.527	-0.1247	No
81	SLC8A3	8722	0.527	-0.1206	No
82	KTN1	8726	0.527	-0.1164	No
83	ZNF143	8747	0.526	-0.1132	No
84	ARMCX6	8778	0.524	-0.1105	No
85	CLDN23	8846	0.521	-0.1098	No
86	TOB2	8855	0.520	-0.1060	No
87	KPNA3	8860	0.520	-0.1019	No
88	TP63	8944	0.514	-0.1021	No
89	ADCY2	8979	0.512	-0.0996	No
90	TWIST1	9004	0.511	-0.0966	No
91	PCDH11X	9060	0.507	-0.0953	No
92	PCDH11Y	9229	0.499	-0.1001	No
93	AMPD1	9523	0.483	-0.1117	No
94	HOXD4	9774	0.469	-0.1210	No
95	PRKAG1	9838	0.465	-0.1201	No
96	NDP	9872	0.463	-0.1176	No
97	CFL2	9918	0.461	-0.1157	No
98	CYP2E1	9929	0.460	-0.1120	No
99	HDAC9	9968	0.458	-0.1097	No
100	CRTAP	10520	0.427	-0.1354	No
101	ARR3	10557	0.425	-0.1330	No
102	INPP4A	10563	0.425	-0.1290	No
103	LCP1	10570	0.424	-0.1250	No
104	TNFRSF17	10602	0.423	-0.1224	No
105	CLCN1	10604	0.423	-0.1181	No
106	PLAGL2	10726	0.416	-0.1204	No
107	EYA1	10995	0.403	-0.1306	No
108	MAP2K5	11207	0.390	-0.1378	No
109	ARHGAP32	11344	0.382	-0.1409	Yes
110	PPP1R3D	11346	0.382	-0.1366	Yes
111	PAX3	11458	0.376	-0.1383	Yes
112	VEZF1	11474	0.376	-0.1348	Yes
113	RAP2C	11524	0.373	-0.1332	Yes
114	KCNQ5	11592	0.369	-0.1325	Yes
115	ART5	11696	0.363	-0.1338	Yes
116	TRPS1	11721	0.362	-0.1308	Yes
117	SLCO3A1	11723	0.362	-0.1265	Yes
118	CA7	11752	0.359	-0.1238	Yes
119	GCK	11793	0.356	-0.1216	Yes
120	ATP2A3	11841	0.354	-0.1199	Yes
121	ITGB3BP	11979	0.345	-0.1230	Yes
122	POU4F1	12001	0.344	-0.1198	Yes
123	FITM1	12037	0.342	-0.1174	Yes
124	TNNC2	12068	0.341	-0.1147	Yes
125	GAL3ST3	12096	0.339	-0.1119	Yes
126	DLX5	12142	0.336	-0.1100	Yes
127	CDC42EP3	12174	0.334	-0.1074	Yes
128	KCNN1	12222	0.331	-0.1056	Yes
129	CLDN14	12258	0.329	-0.1032	Yes
130	TSC22D1	12261	0.329	-0.0990	Yes
131	RASGRP3	12444	0.318	-0.1046	Yes
132	S100A4	12635	0.308	-0.1106	Yes
133	SH3GLB2	12725	0.302	-0.1112	Yes
134	RASGEF1B	12742	0.301	-0.1077	Yes
135	FAM65A	12872	0.294	-0.1104	Yes
136	FAM134B	12880	0.294	-0.1065	Yes
137	SMARCA2	12953	0.290	-0.1061	Yes
138	ADCYAP1	12979	0.288	-0.1031	Yes
139	MYL2	13055	0.283	-0.1029	Yes
140	SIPA1L1	13075	0.282	-0.0996	Yes
141	LRRC20	13089	0.281	-0.0960	Yes
142	DGKI	13120	0.280	-0.0933	Yes
143	GPR153	13401	0.265	-0.1043	Yes
144	LIF	13414	0.264	-0.1006	Yes
145	ELAVL4	13487	0.261	-0.1002	Yes
146	PDLIM1	13492	0.261	-0.0961	Yes
147	CKM	13522	0.259	-0.0934	Yes
148	PANK1	13568	0.256	-0.0915	Yes
149	TCEAL7	13755	0.244	-0.0973	Yes
150	PDGFRA	13836	0.240	-0.0973	Yes
151	ATXN1	13933	0.235	-0.0983	Yes
152	TTYH2	13978	0.233	-0.0963	Yes
153	MBNL2	14318	0.214	-0.1105	Yes
154	MGST3	14351	0.213	-0.1079	Yes
155	RGAG1	14485	0.205	-0.1108	Yes
156	MEF2C	14499	0.204	-0.1072	Yes
157	ARHGAP36	14558	0.201	-0.1060	Yes
158	DLG2	14613	0.198	-0.1047	Yes
159	ASB16	14789	0.189	-0.1099	Yes
160	PLEKHA6	14940	0.181	-0.1137	Yes
161	CUX1	15049	0.174	-0.1153	Yes
162	HOXB4	15095	0.172	-0.1134	Yes
163	STOML2	15111	0.171	-0.1099	Yes
164	NDRG2	15115	0.171	-0.1058	Yes
165	DNAJA4	15125	0.170	-0.1019	Yes
166	SIK3	15212	0.166	-0.1023	Yes
167	NFAT5	15359	0.160	-0.1059	Yes
168	FILIP1	15413	0.156	-0.1045	Yes
169	WFDC1	15489	0.152	-0.1043	Yes
170	ESR1	15554	0.149	-0.1034	Yes
171	DMD	15593	0.147	-0.1012	Yes
172	RNF145	15684	0.142	-0.1018	Yes
173	MAB21L2	15691	0.142	-0.0978	Yes
174	LYPD1	15751	0.139	-0.0967	Yes
175	VSIG1	15819	0.135	-0.0960	Yes
176	IRS1	15837	0.134	-0.0926	Yes
177	ATF3	15920	0.129	-0.0928	Yes
178	ESAM	16116	0.118	-0.0991	Yes
179	B3GALTL	16207	0.113	-0.0996	Yes
180	PPP2R3A	16392	0.103	-0.1053	Yes
181	CPEB4	16396	0.103	-0.1012	Yes
182	BZW2	16401	0.103	-0.0971	Yes
183	CASQ1	16428	0.101	-0.0942	Yes
184	TNNC1	16504	0.098	-0.0940	Yes
185	STRADB	16505	0.098	-0.0896	Yes
186	CACNA2D3	16603	0.092	-0.0906	Yes
187	NEDD4	16629	0.091	-0.0877	Yes
188	SHANK1	16681	0.088	-0.0861	Yes
189	RAB2A	16737	0.085	-0.0848	Yes
190	COL8A1	16772	0.084	-0.0823	Yes
191	SLAMF1	16811	0.081	-0.0801	Yes
192	CSRP3	16840	0.080	-0.0773	Yes
193	ARHGAP26	16881	0.077	-0.0752	Yes
194	ARHGEF15	16890	0.077	-0.0713	Yes
195	MYH3	16999	0.071	-0.0728	Yes
196	SLC9A5	17039	0.070	-0.0707	Yes
197	ZNF385B	17046	0.069	-0.0667	Yes
198	HAS2	17068	0.068	-0.0635	Yes
199	NRXN3	17075	0.068	-0.0595	Yes
200	PYY	17151	0.064	-0.0593	Yes
201	ARHGEF38	17157	0.064	-0.0552	Yes
202	KLF14	17193	0.062	-0.0528	Yes
203	SLC26A6	17270	0.059	-0.0527	Yes
204	ENO3	17390	0.052	-0.0548	Yes
205	SOX5	17554	0.044	-0.0594	Yes
206	DIRAS1	17627	0.040	-0.0590	Yes
207	CASQ2	17628	0.040	-0.0547	Yes
208	FBXW11	17640	0.040	-0.0509	Yes
209	TRAK2	17675	0.038	-0.0485	Yes
210	ZFAND5	17687	0.037	-0.0448	Yes
211	WSB2	17725	0.036	-0.0425	Yes
212	HAPLN1	17747	0.035	-0.0393	Yes
213	CTNND2	17793	0.033	-0.0374	Yes
214	BAI3	17905	0.028	-0.0392	Yes
215	TNNI3K	17913	0.028	-0.0352	Yes
216	TMEM71	17914	0.028	-0.0309	Yes
217	PRDM1	17956	0.026	-0.0288	Yes
218	EPHA7	18027	0.022	-0.0283	Yes
219	S1PR1	18082	0.020	-0.0270	Yes
220	CAPN3	18138	0.016	-0.0256	Yes
221	PCDH9	18140	0.016	-0.0214	Yes
222	CELF4	18142	0.016	-0.0171	Yes
223	TPP2	18235	0.013	-0.0178	Yes
224	ZFPM2	18279	0.011	-0.0158	Yes
225	LRRTM4	18340	0.008	-0.0148	Yes
226	ADAM11	18369	0.007	-0.0120	Yes
227	MUSK	18392	0.006	-0.0089	Yes
228	DTNB	18435	0.005	-0.0069	Yes
229	EHD1	18448	0.004	-0.0032	Yes
230	GRIN2B	18516	0.002	-0.0025	Yes
231	STAG2	18563	0.001	-0.0007	Yes
232	SLC44A1	18607	0.000	0.0013	Yes